Prof Christopher Ramsey

Abstract:

The characterization of biomolecules from ancient samples can shed otherwise unobtainable insights into the past. Despite the fundamental role of transcriptomal change in evolution, the potential of ancient RNA remains unexploited - perhaps due to dogma associated with the fragility of RNA. We hypothesize that seeds offer a plausible refuge for long-term RNA survival, due to the fundamental role of RNA during seed germination. Using RNA-Seq on cDNA synthesized from nucleic acid extracts, we validate this hypothesis through demonstration of partial transcriptomal recovery from two sources of ancient maize kernels. The results suggest that ancient seed transcriptomics may offer a powerful new tool with which to study plant domestication.

Abstract:

Tephra from the Cape Riva (Y-2) eruption of Santorini has been found across the eastern Mediterranean. It presents an important link between marine and terrestrial records. A Poisson process (P Sequence) age-depth prior, with model averaging, is used to model individual previously published radiocarbon sequences, cross-linked with an exponential phase model parameter to obtain a robust age. Multiple sequences and 14C determinations from 3 eastern Mediterranean data sets (Seymour et al. 2004; Margari et al. 2009; Müller et al. 2011; Roeser et al. 2012) are used in the model. The modeled age of the Y-2 tephra produced within this study is 22,329–21,088 cal BP at 95.4% probability.

Abstract:

OxCal is a widely used software package for the calibration of radiocarbon dates and the statistical analysis of 14C and other chronological information. The program aims to make statistical methods easily available to researchers and students working in a range of different disciplines. This paper will look at the recent and planned developments of the package. The recent additions to the statistical methods are primarily aimed at providing more robust models, in particular through model averaging for deposition models and through different multiphase models. The paper will look at how these new models have been implemented and explore the implications for researchers who might benefit from their use. In addition, a new approach to the evaluation of marine reservoir offsets will be presented. As the quantity and complexity of chronological data increase, it is also important to have efficient methods for the visualization of such extensive data sets and methods for the presentation of spatial and geographical data embedded within planned future versions of OxCal will also be discussed.