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CMP
Credit: Jack Hobhouse

Professor Stephen Tucker

Professor of Biophysics

Research theme

  • Biological physics

Sub department

  • Condensed Matter Physics

Research groups

  • Ion channels
Stephen.Tucker@physics.ox.ac.uk
Telephone: 01865 (2)72382
Biochemistry Building, room 30-090 Kavli Institute, DCHB
  • About
  • Publications

Annotating Ion Channel Pores: Structures, Hydrophobicity and the Threshold for Permeation

Biophysical Journal Elsevier 118:3 (2020) 272a

Authors:

Shanlin Rao, Gianni Klesse, Stephen J Tucker, Mark SP Sansom
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Structure and assembly of calcium homeostasis modulator proteins.

Nat Struct Mol Biol 27:2 (2020) 150-159

Authors:

Johanna L Syrjanen, Kevin Michalski, Tsung-Han Chou, Timothy Grant, Shanlin Rao, Noriko Simorowski, Stephen J Tucker, Nikolaus Grigorieff, Hiro Furukawa

Abstract:

The biological membranes of many cell types contain large-pore channels through which a wide variety of ions and metabolites permeate. Examples include connexin, innexin and pannexin, which form gap junctions and/or bona fide cell surface channels. The most recently identified large-pore channels are the calcium homeostasis modulators (CALHMs), through which ions and ATP permeate in a voltage-dependent manner to control neuronal excitability, taste signaling and pathologies of depression and Alzheimer's disease. Despite such critical biological roles, the structures and patterns of their oligomeric assembly remain unclear. Here, we reveal the structures of two CALHMs, chicken CALHM1 and human CALHM2, by single-particle cryo-electron microscopy (cryo-EM), which show novel assembly of the four transmembrane helices into channels of octamers and undecamers, respectively. Furthermore, molecular dynamics simulations suggest that lipids can favorably assemble into a bilayer within the larger CALHM2 pore, but not within CALHM1, demonstrating the potential correlation between pore size, lipid accommodation and channel activity.
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Selectivity filter instability dominates the low intrinsic activity of the TWIK-1 K2P K+ Channel.

The Journal of biological chemistry (2019)

Authors:

Ehsan Nematian-Ardestani, M Firdaus Abd-Wahab, Franck C Chatelain, Han Sun, Marcus Schewe, Thomas Baukrowitz, Stephen J Tucker

Abstract:

Two-pore domain (K2P) K+ channels have many important physiological functions. However, the functional properties of the TWIK-1 (K2P1.1/KCNK1) K2P channel remain poorly characterized because heterologous expression of this ion channel yields only very low levels of functional activity. Several underlying reasons have been proposed, including TWIK-1 retention in intracellular organelles, inhibition by post-translational sumoylation, a hydrophobic barrier within the pore, and a low open probability of the selectivity filter (SF) gate. By evaluating these various potential mechanisms, we found that the latter dominates the low intrinsic functional activity of TWIK-1. Investigating the underlying mechanism, we observed that the low activity of the SF gate appears to arise from the inefficiency of K+ in stabilizing an active (i.e. conductive) SF conformation. In contrast, other permeant ion species, such as Rb+, NH4+, and Cs+, strongly promoted a pH-dependent activated conformation. Furthermore, many K2P channels are activated by membrane depolarization via a SF-mediated gating mechanism, but we found here that only very strong, non-physiological depolarization produces voltage-dependent activation of heterologously expressed TWIK-1. Remarkably, we also observed that TWIK-1 Rb+ currents are potently inhibited by intracellular K+ (IC50 = 2.8 mM). We conclude that TWIK-1 displays unique SF gating properties among the family of K2P channels. In particular, the apparent instability of the conductive conformation of the TWIK-1 SF in the presence of K+ appears to dominate the low levels of intrinsic functional activity observed when the channel is expressed at the cell surface.
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Inwardly rectifying potassium channels (version 2019.4) in the IUPHAR/BPS Guide to Pharmacology Database

IUPHAR/BPS Guide to Pharmacology CITE University of Edinburgh 2019:4 (2019)

Authors:

John P Adelman, David E Clapham, Hiroshi Hibino, Atsushi Inanobe, Lily Y Jan, Andreas Karschin, Yoshihiro Kubo, Yoshihisa Kurachi, Michel Lazdunski, Takashi Miki, Colin G Nichols, Lawrence G Palmer, Wade L Pearson, Henry Sackin, Susumu Seino, Paul A Slesinger, Stephen Tucker, Carol A Vandenberg
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Selectivity filter instability dominates the low intrinsic activity of the TWIK-1 K2P K+ Channel

Cold Spring Harbor Laboratory (2019) 735704

Authors:

Ehsan Nematian-Ardestani, M Firdaus Abd-Wahab, Franck C Chatelain, Han Sun, Marcus Schewe, Thomas Baukrowitz, Stephen J Tucker
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