Single-Molecule Studies of Rotary Molecular Motors

Chapter in Handbook of Single-Molecule Biophysics, Springer Nature (2009) 183-216

Authors:

Teuta Pilizota, Yoshiyuki Sowa, Richard M Berry

Variable stoichiometry of the TatA component of the twin-arginine protein transport system observed by in vivo single-molecule imaging.

Proc Natl Acad Sci U S A 105:40 (2008) 15376-15381

Authors:

Mark C Leake, Nicholas P Greene, Rachel M Godun, Thierry Granjon, Grant Buchanan, Shuyun Chen, Richard M Berry, Tracy Palmer, Ben C Berks

Abstract:

The twin-arginine translocation (Tat) system transports folded proteins across the bacterial cytoplasmic membrane and the thylakoid membrane of plant chloroplasts. The essential components of the Tat pathway are the membrane proteins TatA, TatB, and TatC. TatA is thought to form the protein translocating element of the Tat system. Current models for Tat transport make predictions about the oligomeric state of TatA and whether, and how, this state changes during the transport cycle. We determined the oligomeric state of TatA directly at native levels of expression in living cells by photophysical analysis of individual yellow fluorescent protein-labeled TatA complexes. TatA forms complexes exhibiting a broad range of stoichiometries with an average of approximately 25 TatA subunits per complex. Fourier analysis of the stoichiometry distribution suggests the complexes are assembled from tetramer units. Modeling the diffusion behavior of the complexes suggests that TatA protomers associate as a ring and not a bundle. Each cell contains approximately 15 mobile TatA complexes and a pool of approximately 100 TatA molecules in a more disperse state in the membrane. Dissipation of the protonmotive force that drives Tat transport has no affect on TatA complex stoichiometry. TatA complexes do not form in cells lacking TatBC, suggesting that TatBC controls the oligomeric state of TatA. Our data support the TatA polymerization model for the mechanism of Tat transport.

Characterization and Application of Controllable Local Chemical Changes Produced by Reagent Delivery from a Nanopipet

Journal of the American Chemical Society American Chemical Society (ACS) 130:31 (2008) 10386-10393

Authors:

Joe D Piper, Chao Li, Chien-Jung Lo, Richard Berry, Yuri Korchev, Liming Ying, David Klenerman

Determination of torque generation from the power stroke of Escherichia coli F1-ATPase.

Biochim Biophys Acta 1777:7-8 (2008) 579-582

Authors:

T Hornung, R Ishmukhametov, D Spetzler, J Martin, WD Frasch

Abstract:

The torque generated by the power stroke of Escherichia coli F(1)-ATPase was determined as a function of the load from measurements of the velocity of the gamma-subunit obtained using a 0.25 micros time resolution and direct measurements of the drag from 45 to 91 nm gold nanorods. This result was compared to values of torque calculated using four different drag models. Although the gamma-subunit was able to rotate with a 20x increase in viscosity, the transition time decreased from 0.4 ms to 5.26 ms. The torque was measured to be 63+/-8 pN nm, independent of the load on the enzyme.

How bacteria change gear

Science 320:5883 (2008) 1599-1600

Authors:

RM Berry, JP Armitage

Abstract:

Bacterial motility is arrested when a protein that acts as a clutch disables rotation of the flagellar motor.