Transport and self-organization across different length scales powered by motor proteins and programmed by DNA

Nature Nanotechnology 9:1 (2014) 44-47

Authors:

AJM Wollman, C Sanchez-Cano, HMJ Carstairs, RA Cross, AJ Turberfield

Abstract:

In eukaryotic cells, cargo is transported on self-organized networks of microtubule trackways by kinesin and dynein motor proteins. Synthetic microtubule networks have previously been assembled in vitro, and microtubules have been used as shuttles to carry cargoes on lithographically defined tracks consisting of surface-bound kinesin motors. Here, we show that molecular signals can be used to program both the architecture and the operation of a self-organized transport system that is based on kinesin and microtubules and spans three orders of magnitude in length scale. A single motor protein, dimeric kinesin-1, is conjugated to various DNA nanostructures to accomplish different tasks. Instructions encoded into the DNA sequences are used to direct the assembly of a polar array of microtubules and can be used to control the loading, active concentration and unloading of cargo on this track network, or to trigger the disassembly of the network. © 2014 Macmillan Publishers Limited.

Controlling ARF stability: new players added to the team.

Cell cycle (Georgetown, Tex.) 13:4 (2014) 497-498

Authors:

Omid Tavana, Delin Chen, Wei Gu

Molecular Machinery from DNA: Synthetic Biology from the Bottom up

Biophysical Journal Elsevier 106:2 (2014) 23a

Transport and self-organization across different length scales powered by motor proteins and programmed by DNA.

Nat Nanotechnol 9:1 (2014) 44-47

Authors:

Adam JM Wollman, Carlos Sanchez-Cano, Helen MJ Carstairs, Robert A Cross, Andrew J Turberfield

Abstract:

In eukaryotic cells, cargo is transported on self-organized networks of microtubule trackways by kinesin and dynein motor proteins. Synthetic microtubule networks have previously been assembled in vitro, and microtubules have been used as shuttles to carry cargoes on lithographically defined tracks consisting of surface-bound kinesin motors. Here, we show that molecular signals can be used to program both the architecture and the operation of a self-organized transport system that is based on kinesin and microtubules and spans three orders of magnitude in length scale. A single motor protein, dimeric kinesin-1, is conjugated to various DNA nanostructures to accomplish different tasks. Instructions encoded into the DNA sequences are used to direct the assembly of a polar array of microtubules and can be used to control the loading, active concentration and unloading of cargo on this track network, or to trigger the disassembly of the network.

"Giant surfactants" created by the fast and efficient functionalization of a DNA tetrahedron with a temperature-responsive polymer.

ACS Nano 7:10 (2013) 8561-8572

Authors:

Thomas R Wilks, Jonathan Bath, Jan Willem de Vries, Jeffery E Raymond, Andreas Herrmann, Andrew J Turberfield, Rachel K O'Reilly

Abstract:

Copper catalyzed azide-alkyne cycloaddition (CuAAC) was employed to synthesize DNA block copolymers (DBCs) with a range of polymer blocks including temperature-responsive poly(N-isoproylacrylamide) (poly(NIPAM)) and highly hydrophobic poly(styrene). Exceptionally high yields were achieved at low DNA concentrations, in organic solvents, and in the absence of any solid support. The DNA segment of the DBC remained capable of sequence-specific hybridization: it was used to assemble a precisely defined nanostructure, a DNA tetrahedron, with pendant poly(NIPAM) segments. In the presence of an excess of poly(NIPAM) homopolymer, the tetrahedron-poly(NIPAM) conjugate nucleated the formation of large, well-defined nanoparticles at 40 °C, a temperature at which the homopolymer precipitated from solution. These composite nanoparticles were observed by dynamic light scattering and cryoTEM, and their hybrid nature was confirmed by AFM imaging. As a result of the large effective surface area of the tetrahedron, only very low concentrations of the conjugate were required in order for this surfactant-like behavior to be observed.