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Ligand Recognition Mechanism of Thiamine Pyrophosphate Riboswitch Aptamer

BULLETIN OF THE KOREAN CHEMICAL SOCIETY 38:12 (2017) 1465-1473

Authors:

Heesoo Uhm, Sungchul Hohng
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Precision and accuracy of single-molecule FRET measurements - a worldwide benchmark study

(2017)

Authors:

Björn Hellenkamp, Sonja Schmid, Olga Doroshenko, Oleg Opanasyuk, Ralf Kühnemuth, Soheila Rezaei Adariani, Anders Barth, Victoria Birkedal, Mark E Bowen, Hongtao Chen, Thorben Cordes, Tobias Eilert, Carel Fijen, Markus Götz, Giorgos Gouridis, Enrico Gratton, Taekjip Ha, Christian A Hanke, Andreas Hartmann, Jelle Hendrix, Lasse L Hildebrandt, Johannes Hohlbein, Christian G Hübner, Eleni Kallis, Achillefs N Kapanidis, Jae-Yeol Kim, Georg Krainer, Don C Lamb, Nam Ki Lee, Edward A Lemke, Brié Levesque, Marcia Levitus, James J McCann, Nikolaus Naredi-Rainer, Daniel Nettels, Thuy Ngo, Ruoyi Qiu, Carlheinz Röcker, Hugo Sanabria, Michael Schlierf, Benjamin Schuler, Henning Seidel, Lisa Streit, Philip Tinnefeld, Swati Tyagi, Niels Vandenberk, Keith R Weninger, Bettina Wünsch, Inna S Yanez-Orozco, Jens Michaelis, Claus AM Seidel, Timothy D Craggs, Thorsten Hugel
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Bacterial Translocation Ratchets: Shared Physical Principles with Different Molecular Implementations

BioEssays Wiley 39:10 (2017)

Authors:

Christof Hepp, Berenike Maier
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Specific DNA sequences allosterically enhance protein–protein interaction in a transcription factor through modulation of protein dynamics: implications for specificity of gene regulation

Physical Chemistry Chemical Physics Royal Society of Chemistry (RSC) 19:22 (2017) 14781-14792

Authors:

Abhishek Mazumder, Subrata Batabyal, Manas Mondal, Tanumoy Mondol, Susobhan Choudhury, Raka Ghosh, Tanaya Chatterjee, Dhananjay Bhattacharyya, Samir Kumar Pal, Siddhartha Roy
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Single-molecule and super-resolution imaging of transcription in living bacteria.

Methods (San Diego, Calif.) 120 (2017) 103-114

Authors:

M Stracy, AN Kapanidis

Abstract:

In vivo single-molecule and super-resolution techniques are transforming our ability to study transcription as it takes place in its native environment in living cells. This review will detail the methods for imaging single molecules in cells, and the data-analysis tools which can be used to extract quantitative information on the spatial organization, mobility, and kinetics of the transcription machinery from these experiments. Furthermore, we will highlight studies which have applied these techniques to shed new light on bacterial transcription.
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