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CMP
Credit: Jack Hobhouse

Professor Achillefs Kapanidis

Professor of Biological Physics

Research theme

  • Biological physics

Sub department

  • Condensed Matter Physics

Research groups

  • Gene machines
Achillefs.Kapanidis@physics.ox.ac.uk
Telephone: 01865 (2)72226
Biochemistry Building
groups.physics.ox.ac.uk/genemachines/group
  • About
  • Publications

Tracking antibiotic mechanisms.

Nature reviews. Microbiology 17:4 (2019) 201-201

Authors:

Oliver J Pambos, Achillefs N Kapanidis
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Single Nitrogen-Vacancy Imaging in Nanodiamonds for Multimodal Sensing

Biophysical Journal Elsevier 116:3 (2019) 174a

Authors:

Maabur Sow, Horst Steuer, Barak Gilboa, Laia Gines, Soumen Mandal, Sanmi Adekanye, Jason M Smith, Oliver A Williams, Achillefs N Kapanidis
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Guidelines for DNA recombination and repair studies: Mechanistic assays of DNA repair processes.

Microbial cell (Graz, Austria) 6:1 (2019) 65-101

Authors:

Hannah L Klein, Kenny KH Ang, Michelle R Arkin, Emily C Beckwitt, Yi-Hsuan Chang, Jun Fan, Youngho Kwon, Michael J Morten, Sucheta Mukherjee, Oliver J Pambos, Hafez El Sayyed, Elizabeth S Thrall, João P Vieira-da-Rocha, Quan Wang, Shuang Wang, Hsin-Yi Yeh, Julie S Biteen, Peter Chi, Wolf-Dietrich Heyer, Achillefs N Kapanidis, Joseph J Loparo, Terence R Strick, Patrick Sung, Bennett Van Houten, Hengyao Niu, Eli Rothenberg

Abstract:

Genomes are constantly in flux, undergoing changes due to recombination, repair and mutagenesis. In vivo, many of such changes are studies using reporters for specific types of changes, or through cytological studies that detect changes at the single-cell level. Single molecule assays, which are reviewed here, can detect transient intermediates and dynamics of events. Biochemical assays allow detailed investigation of the DNA and protein activities of each step in a repair, recombination or mutagenesis event. Each type of assay is a powerful tool but each comes with its particular advantages and limitations. Here the most commonly used assays are reviewed, discussed, and presented as the guidelines for future studies.
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Tightly Regulated, yet Flexible and Ultrasensitive, 2 Directional Switching Mechanism of a Rotary Motor

(2019)

Authors:

Oshri Afanzar, Diana Di Paolo, Miriam Eisenstein, Kohava Levi, Anne Plochowietz, Achillefs N Kapanidis, Richard Berry, Michael Eisenbach
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Publisher Correction: Precision and accuracy of single-molecule FRET measurements-a multi-laboratory benchmark study.

Nature methods Springer Nature America, Inc (2018)

Authors:

B Hellenkamp, S Schmid, O Doroshenko, O Opanasyuk, R Kühnemuth, Adariani, B Ambrose, M Aznauryan, A Barth, V Birkedal, ME Bowen, H Chen, T Cordes, T Eilert, C Fijen, C Gebhardt, M Götz, G Gouridis, E Gratton, T Ha, P Hao, CA Hanke, A Hartmann, J Hendrix, LL Hildebrandt, V Hirschfeld, J Hohlbein, B Hua, CG Hübner, E Kallis, AN Kapanidis, J-Y Kim, G Krainer, DC Lamb, NK Lee, EA Lemke, B Levesque, M Levitus, JJ McCann, N Naredi-Rainer, D Nettels, T Ngo, R Qiu, NICOLE Robb, C Röcker, H Sanabria, M Schlierf, T Schröder, B Schuler, H Seidel

Abstract:

This paper was originally published under standard Springer Nature copyright. As of the date of this correction, the Analysis is available online as an open-access paper with a CC-BY license. No other part of the paper has been changed.
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