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Theoretical physicists working at a blackboard collaboration pod in the Beecroft building.
Credit: Jack Hobhouse

Julia Yeomans OBE FRS

Professor of Physics

Research theme

  • Biological physics

Sub department

  • Rudolf Peierls Centre for Theoretical Physics

Research groups

  • Condensed Matter Theory
Julia.Yeomans@physics.ox.ac.uk
Telephone: 01865 (2)76884 (college),01865 (2)73992
Rudolf Peierls Centre for Theoretical Physics, room 70.10
www-thphys.physics.ox.ac.uk/people/JuliaYeomans
  • About
  • Publications

Shear dynamics in cholesterics

COMPUT PHYS COMMUN 169:1-3 (2005) 122-125

Authors:

E Orlandini, D Marenduzzo, JM Yeomans

Abstract:

We study shear dynamic in cholesteric liquid crystal using a lattice Boltzmann scheme that solves the full, three-dimensional Beris-Edwards equations of hydrodynamics. We show that the coupling between shear and the natural elastic deformation of cholesterics can induce twist in an initially isotropic phase. (c) 2005 Elsevier B.V. All rights reserved.
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Droplet dynamics on patterned substrates

PRAMANA-J PHYS 64:6 (2005) 1019-1027

Authors:

A Dupuis, JM Yeomans

Abstract:

We present a lattice Boltzmann algorithm which can be used to explore the spreading of droplets on chemically and topologically patterned substrates. As an example we use the method to show that the final configuration of a drop on a substrate comprising hydrophobic and hydrophilic stripes can depend sensitively on the dynamical pathway by which the state is reached. We also consider a substrate covered with micron-scale posts and investigate how this can lead to superhydrophobic behaviour. Finally we model how a Namibian desert beetle collects water from the wind.
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Kinetics of the polymer collapse transition: the role of hydrodynamics.

Phys Rev E Stat Nonlin Soft Matter Phys 71:6 Pt 1 (2005) 061804

Authors:

N Kikuchi, JF Ryder, CM Pooley, JM Yeomans

Abstract:

We investigate numerically the dynamical behavior of a polymer chain collapsing in a dilute solution. The rate of collapse is measured with and without the presence of hydrodynamic interactions. We find that hydrodynamic interactions accelerate polymer collapse. We present a scaling theory describing the physical process responsible for the collapse kinetics. Predicted collapse times in a hydrodynamic (tauH approximately N(4/3)) and a Brownian heat bath (tauB approximately N2) agree well with the numerical results (tauH approximately N(1.40+/-0.08) and tauB approximately N(1.89+/-0.09)) where N denotes chain length. The folding kinetics of Go models of proteins is also examined. We show that for these systems, where many free energy minima compete, hydrodynamics has little effect on the kinetics.
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Modeling a tethered polymer in Poiseuille flow

Journal of Chemical Physics 122:16 (2005)

Authors:

MA Webster, JM Yeomans

Abstract:

We investigate the behavior of a tethered polymer in Poiseuille flow using a multiscale algorithm. The polymer, treated using molecular dynamics, is coupled to a solvent modeled by the stochastic rotation algorithm, a particle-based Navier-Stokes integrator. The expected series of morphological transitions of the polymer: sphere to distorted sphere to trumpet to stem and flower to rod are recovered, and we discuss how the polymer extension depends on the flow velocity. Backflow effects cause an effective increase in viscosity, which appears to be primarily due to the fluctuations of the free end of the polymer. © 2005 American Institute of Physics.
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Modeling a tethered polymer in Poiseuille flow.

J Chem Phys 122:16 (2005) 164903

Authors:

MA Webster, JM Yeomans

Abstract:

We investigate the behavior of a tethered polymer in Poiseuille flow using a multiscale algorithm. The polymer, treated using molecular dynamics, is coupled to a solvent modeled by the stochastic rotation algorithm, a particle-based Navier-Stokes integrator. The expected series of morphological transitions of the polymer: sphere to distorted sphere to trumpet to stem and flower to rod are recovered, and we discuss how the polymer extension depends on the flow velocity. Backflow effects cause an effective increase in viscosity, which appears to be primarily due to the fluctuations of the free end of the polymer.
More details from the publisher
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