A facile method for reversibly linking a recombinant protein to DNA.

Chembiochem 10:9 (2009) 1551-1557

Authors:

Russell P Goodman, Christoph M Erben, Jonathan Malo, Wei M Ho, Mireya L McKee, Achillefs N Kapanidis, Andrew J Turberfield

Abstract:

We present a facile method for linking recombinant proteins to DNA. It is based on the nickel-mediated interaction between a hexahistidine tag (His(6)-tag) and DNA functionalized with three nitrilotriacetic acid (NTA) groups. The resulting DNA-protein linkage is site-specific. It can be broken quickly and controllably by the addition of a chelating agent that binds nickel. We have used this new linker to bind proteins to a variety of DNA motifs commonly used in the fabrication of nanostructures by DNA self-assembly.

Erratum: Coordinated chemomechanical cycles: A mechanism for autonomous molecular motion (Physical Review Letters (2008) 101 (238101))

Physical Review Letters 102:13 (2009)

Authors:

SJ Green, J Bath, AJ Turberfield

Kinetically controlled self-assembly of DNA oligomers.

J Am Chem Soc 131:7 (2009) 2422-2423

Authors:

Daniel Lubrich, Simon J Green, Andrew J Turberfield

Abstract:

Metastable two-stranded DNA loops can be assembled into extended DNA oligomers by kinetically controlled self-assembly. Along the designed reaction pathway, the sequence of hybridization reactions is controlled by progressively revealing toeholds required to initiate strand-displacement reactions. The product length depends inversely on seed concentration and ranges from a few hundred to several thousand base-pairs.

Algorithmic Control: The Assembly and Operation of DNA Nanostructures and Molecular Machinery

ALGORITHMIC BIOPROCESSES (2009) 215-225

Coordinated Chemomechanical Cycles: A Mechanism for Autonomous Molecular Motion (vol 101, 238101, 2008)

PHYSICAL REVIEW LETTERS 102:13 (2009) ARTN 139901

Authors:

SJ Green, J Bath, AJ Turberfield