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Theoretical physicists working at a blackboard collaboration pod in the Beecroft building.
Credit: Jack Hobhouse

Prof Ramin Golestanian

Professor of Theoretical Condensed Matter Physics

Sub department

  • Rudolf Peierls Centre for Theoretical Physics

Research groups

  • Condensed Matter Theory
Ramin.Golestanian@physics.ox.ac.uk
Telephone: 01865 273974
Rudolf Peierls Centre for Theoretical Physics, room 60.12
Max Planck Institute for Dynamics and Self-Organization
Oxford Podcast (2014): Living Matter & Theo Phys
Oxford Podcast (2017): The bacterial Viewpoint
  • About
  • Teaching
  • Publications

Multicellular self-organization of P. aeruginosa due to interactions with secreted trails

Physical Review Letters American Physical Society (2016)

Authors:

Anatolij Gelimson, Kun Zhao, Calvin K Lee, W Till Kranz, Gerard CL Wong, Ramin Golestanian

Abstract:

Guided movement in response to slowly diffusing polymeric trails provides a unique mechanism for self-organization of some microorganisms. To elucidate how this signaling route leads to microcolony formation, we experimentally probe the trajectory and orientation of Pseudomonas aeruginosa that propel themselves on a surface using type IV pili motility appendages, which preferentially attach to deposited exopolysaccharides. We construct a stochastic model by analyzing single-bacterium trajectories, and show that the resulting theoretical prediction for the many-body behavior of the bacteria is in quantitative agreement with our experimental characterization of how cells explore the surface via a power law strategy.
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Current fluctuations in nanopores: The effects of electrostatic and hydrodynamic interactions

The European Physical Journal Special Topics Springer Nature 225:8-9 (2016) 1583-1594

Authors:

Mira Zorkot, Ramin Golestanian, Douwe Jan Bonthuis
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Reply to Comment on "Enhanced diffusion of enzymes that catalyze exothermic reactions"

(2016)
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Effective dynamics of microorganisms that interact with their own trail

Physical Review Letters American Physical Society (2016)

Authors:

Ramin Golestanian, Anatolij Gelimson, W Till Kranz, Kun Zhao, Gerard CL Wong

Abstract:

Like ants, some microorganisms are known to leave trails on surfaces to communicate. We explore how trail-mediated self-interaction could affect the behavior of individual microorganisms when diffusive spreading of the trail is negligible on the timescale of the microorganism using a simple phenomenological model for an actively moving particle and a finite-width trail. The effective dynamics of each microorganism takes on the form of a stochastic integral equation with the trail interaction appearing in the form of short-term memory. For moderate coupling strength below an emergent critical value, the dynamics exhibits effective diffusion in both orientation and position after a phase of superdiffusive reorientation. We report experimental verification of a seemingly counterintuitive perpendicular alignment mechanism that emerges from the model.
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Active micromachines: Microfluidics powered by mesoscale turbulence

Science Advances American Association for the Advancement of Science (2016)

Authors:

Julia Yeomans, Amin Doostmohammadi, Tyler N Shendruk, Sumesh P Thampi, Ramin Golestanian

Abstract:

Dense active matter, from bacterial suspensions and microtubule bundles driven by motor proteins to cellular monolayers and synthetic Janus particles, is characterised by mesoscale turbulence, the emergence of chaotic flow structures. By immersing an ordered array of symmetric rotors in an active fluid, we introduce a microfluidic system that exploits spontaneous symmetry breaking in mesoscale turbulence to generate work. The lattice of rotors self-organises into a spin-state where neighbouring discs continuously rotate in permanent alternating directions due to combined hydrodynamic and elastic effects. Our virtual prototype demonstrates a new research direction for the design of micromachines powered by the nematohydrodynamic properties of active turbulence.
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