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Theoretical physicists working at a blackboard collaboration pod in the Beecroft building.
Credit: Jack Hobhouse

Julia Yeomans OBE FRS

Professor of Physics

Research theme

  • Biological physics

Sub department

  • Rudolf Peierls Centre for Theoretical Physics

Research groups

  • Condensed Matter Theory
Julia.Yeomans@physics.ox.ac.uk
Telephone: 01865 (2)76884 (college),01865 (2)73992
Rudolf Peierls Centre for Theoretical Physics, room 70.10
www-thphys.physics.ox.ac.uk/people/JuliaYeomans
  • About
  • Publications

Activity pulses induce spontaneous flow reversals in viscoelastic environments.

Journal of the Royal Society, Interface The Royal Society 18:177 (2021) ARTN 20210100

Authors:

Emmanuel LC Vi M Plan, Julia M Yeomans, Amin Doostmohammadi

Abstract:

Complex interactions between cellular systems and their surrounding extracellular matrices are emerging as important mechanical regulators of cell functions, such as proliferation, motility and cell death, and such cellular systems are often characterized by pulsating actomyosin activities. Here, using an active gel model, we numerically explore spontaneous flow generation by activity pulses in the presence of a viscoelastic medium. The results show that cross-talk between the activity-induced deformations of the viscoelastic surroundings and the time-dependent response of the active medium to these deformations can lead to the reversal of spontaneously generated active flows. We explain the mechanism behind this phenomenon based on the interaction between the active flow and the viscoelastic medium. We show the importance of relaxation time scales of both the polymers and the active particles and provide a phase space over which such spontaneous flow reversals can be observed. Our results suggest new experiments investigating the role of controlled pulses of activity in living systems ensnared in complex mircoenvironments.
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Morphology of Active Deformable 3D Droplets

PHYSICAL REVIEW X American Physical Society (APS) 11:2 (2021) 21001

Authors:

Liam J Ruskee, Julia M Yeomans

Abstract:

We numerically investigate the morphology and disclination line dynamics of active nematic droplets in three dimensions. Although our model incorporates only the simplest possible form of achiral active stress, active nematic droplets display an unprecedented range of complex morphologies. For extensile activity, fingerlike protrusions grow at points where disclination lines intersect the droplet surface. For contractile activity, however, the activity field drives cup-shaped droplet invagination, run-and-tumble motion, or the formation of surface wrinkles. This diversity of behavior is explained in terms of an interplay between active anchoring, active flows, and the dynamics of the motile disclination lines. We discuss our findings in the light of biological processes such as morphogenesis, collective cancer invasion, and the shape control of biomembranes, suggesting that some biological systems may share the same underlying mechanisms as active nematic droplets.
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Submersed Micropatterned Structures Control Active Nematic Flow, Topology and Concentration

(2021)

Authors:

Kristian Thijssen, Dimitrius Khaladj, S Ali Aghvami, Mohamed Amine Gharbi, Seth Fraden, Julia M Yeomans, Linda S Hirst, Tyler N Shendruk
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Investigating the nature of active forces in tissues reveals how contractile cells can form extensile monolayers

Nature Materials Nature Research 20:8 (2021) 1156-1166

Authors:

Lakshmi Balasubramaniam, Amin Doostmohammadi, Thuan Beng Saw, Gautham Hari Narayana Sankara Narayana, Romain Mueller, Tien Dang, Minnah Thomas, Shafali Gupta, Surabhi Sonam, Alpha S Yap, Yusuke Toyama, René-Marc Mège, Julia M Yeomans, Benoît Ladoux

Abstract:

Actomyosin machinery endows cells with contractility at a single-cell level. However, within a monolayer, cells can be contractile or extensile based on the direction of pushing or pulling forces exerted by their neighbours or on the substrate. It has been shown that a monolayer of fibroblasts behaves as a contractile system while epithelial or neural progentior monolayers behave as an extensile system. Through a combination of cell culture experiments and in silico modelling, we reveal the mechanism behind this switch in extensile to contractile as the weakening of intercellular contacts. This switch promotes the build-up of tension at the cell–substrate interface through an increase in actin stress fibres and traction forces. This is accompanied by mechanotransductive changes in vinculin and YAP activation. We further show that contractile and extensile differences in cell activity sort cells in mixtures, uncovering a generic mechanism for pattern formation during cell competition, and morphogenesis.
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Activity pulses induce spontaneous flow reversals in viscoelastic environments

(2021)

Authors:

Emmanuel LC VI M Plan, Julia M Yeomans, Amin Doostmohammadi
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