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Theoretical physicists working at a blackboard collaboration pod in the Beecroft building.
Credit: Jack Hobhouse

Julia Yeomans OBE FRS

Professor of Physics

Research theme

  • Biological physics

Sub department

  • Rudolf Peierls Centre for Theoretical Physics

Research groups

  • Condensed Matter Theory
Julia.Yeomans@physics.ox.ac.uk
Telephone: 01865 (2)76884 (college),01865 (2)73992
Rudolf Peierls Centre for Theoretical Physics, room 70.10
www-thphys.physics.ox.ac.uk/people/JuliaYeomans
  • About
  • Publications

Active Nematics: Mesoscale Turbulence and Self-propelled Topological Defects

Chapter in Out-of-equilibrium Soft Matter, Royal Society of Chemistry (RSC) (2023) 88-106
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Correction to: 'Collective rotational motion of freely expanding T84 epithelial cell colonies' (2023) by Ascione et al.

Journal of the Royal Society, Interface 20:200 (2023) 20230114

Authors:

Flora Ascione, Sergio Caserta, Speranza Esposito, Valeria Rachela Villella, Luigi Maiuri, Mehrana R Nejad, Amin Doostmohammadi, Julia M Yeomans, Stefano Guido
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Collective rotational motion of freely expanding T84 epithelial cell colonies

Journal of the Royal Society: Interface The Royal Society 20:199 (2023)

Authors:

Flora Ascione, Sergio Caserta, Speranza Esposito, Valeria Rachela Villella, Luigi Maiuri, Mehrana R Nejad, Amin Doostmohammadi, Julia M Yeomans, Stefano Guido

Abstract:

Coordinated rotational motion is an intriguing, yet still elusive mode of collective cell migration, which is relevant in pathological and morphogenetic processes. Most of the studies on this topic have been carried out on epithelial cells plated on micropatterned substrates, where cell motion is confined in regions of well-defined shapes coated with extracellular matrix adhesive proteins. The driver of collective rotation in such conditions has not been clearly elucidated, although it has been speculated that spatial confinement can play an essential role in triggering cell rotation. Here, we study the growth of epithelial cell colonies freely expanding (i.e. with no physical constraints) on the surface of cell culture plates and focus on collective cell rotation in such conditions, a case which has received scarce attention in the literature. One of the main findings of our work is that coordinated cell rotation spontaneously occurs in cell clusters in the free growth regime, thus implying that cell confinement is not necessary to elicit collective rotation as previously suggested. The extent of collective rotation was size and shape dependent: a highly coordinated disc-like rotation was found in small cell clusters with a round shape, while collective rotation was suppressed in large irregular cell clusters generated by merging of different clusters in the course of their growth. The angular motion was persistent in the same direction, although clockwise and anticlockwise rotations were equally likely to occur among different cell clusters. Radial cell velocity was quite low as compared to the angular velocity, in agreement with the free expansion regime where cluster growth is essentially governed by cell proliferation. A clear difference in morphology was observed between cells at the periphery and the ones in the core of the clusters, the former being more elongated and spread out as compared to the latter. Overall, our results, to our knowledge, provide the first quantitative and systematic evidence that coordinated cell rotation does not require a spatial confinement and occurs spontaneously in freely expanding epithelial cell colonies, possibly as a mechanism for the system.

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Steering self-organisation through confinement

Soft Matter Royal Society of Chemistry 19:9 (2023) 1695-1704

Authors:

Nuno AM Araújo, Liesbeth MC Janssen, Thomas Barois, Guido Boffetta, Itai Cohen, Alessandro Corbetta, Olivier Dauchot, Marjolein Dijkstra, William M Durham, Audrey Dussutour, Simon Garnier, Hanneke Gelderblom, Ramin Golestanian, Lucio Isa, Gijsje H Koenderink, Hartmut Löwen, Ralf Metzler, Marco Polin, C Patrick Royall, Anđela Šarić, Anupam Sengupta, Cécile Sykes, Vito Trianni, Idan Tuval, Nicolas Vogel, Julia M Yeomans, Iker Zuriguel, Alvaro Marin, Giorgio Volpe

Abstract:

Self-organisation is the spontaneous emergence of spatio-temporal structures and patterns from the interaction of smaller individual units. Examples are found across many scales in very different systems and scientific disciplines, from physics, materials science and robotics to biology, geophysics and astronomy. Recent research has highlighted how self-organisation can be both mediated and controlled by confinement. Confinement is an action over a system that limits its units’ translational and rotational degrees of freedom, thus also influencing the system's phase space probability density; it can function as either a catalyst or inhibitor of self-organisation. Confinement can then become a means to actively steer the emergence or suppression of collective phenomena in space and time. Here, to provide a common framework and perspective for future research, we examine the role of confinement in the self-organisation of soft-matter systems and identify overarching scientific challenges that need to be addressed to harness its full scientific and technological potential in soft matter and related fields. By drawing analogies with other disciplines, this framework will accelerate a common deeper understanding of self-organisation and trigger the development of innovative strategies to steer it using confinement, with impact on, e.g., the design of smarter materials, tissue engineering for biomedicine and in guiding active matter.
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Active forces in confluent cell monolayers

Physical Review Letters American Physical Society 130:3 (2023) 038202

Authors:

Guanming Zhang, Julia M Yeomans

Abstract:

We use a computational phase-field model together with analytical analysis to study how intercellular active forces can mediate individual cell morphology and collective motion in a confluent cell monolayer. We explore the regime where intercellular forces dominate the tissue dynamics, and polar forces are negligible. Contractile intercellular interactions lead to cell elongation, nematic ordering, and active turbulence characterized by motile topological defects. Extensile interactions result in frustration, and perpendicular cell orientations become more prevalent. Furthermore, we show that contractile behavior can change to extensile behavior if anisotropic fluctuations in cell shape are considered.
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