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Theoretical physicists working at a blackboard collaboration pod in the Beecroft building.
Credit: Jack Hobhouse

Ramin Golestanian FRS

Professor of Theoretical Condensed Matter Physics

Sub department

  • Rudolf Peierls Centre for Theoretical Physics

Research groups

  • Condensed Matter Theory
Ramin.Golestanian@physics.ox.ac.uk
Telephone: 01865 273974
Rudolf Peierls Centre for Theoretical Physics, room 60.12
Max Planck Institute for Dynamics and Self-Organization
Oxford Podcast (2014): Living Matter & Theo Phys
Oxford Podcast (2017): The bacterial Viewpoint
  • About
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  • Publications

Probing passive diffusion of flagellated and deflagellated Escherichia coli.

The European physical journal. E, Soft matter 34:2 (2011) 1-7

Authors:

S Tavaddod, MA Charsooghi, F Abdi, HR Khalesifard, R Golestanian

Abstract:

Using particle-tracking techniques, the translational and rotational diffusion of paralyzed E. coli with and without flagella are studied experimentally. The position and orientation of the bacteria are tracked in the lab frame and their corresponding mean-square displacements are analyzed in the lab frame and in the body frame to extract the intrinsic anisotropic translational diffusion coefficients as well as the rotational diffusion coefficient for both strains. The deflagellated strain is found to show an anisotropic translational diffusion, with diffusion coefficients that are compatible with theoretical estimates based on its measured geometrical features. The corresponding translational diffusion coefficients of the flagellated strain have been found to be reduced as compared to those of the deflagellated counterpart. Similar results have also been found for the rotational diffusion coefficients of the two strains. Our results suggest that the presence of flagella --even as a passive component-- has a significant role in the dynamics of E. coli, and should be taken into account in theoretical studies of its motion.

Probing passive diffusion of flagellated and deflagellated Escherichia coli.

Eur Phys J E Soft Matter 34:2 (2011) 16

Authors:

S Tavaddod, MA Charsooghi, F Abdi, HR Khalesifard, R Golestanian

Abstract:

Using particle-tracking techniques, the translational and rotational diffusion of paralyzed E. coli with and without flagella are studied experimentally. The position and orientation of the bacteria are tracked in the lab frame and their corresponding mean-square displacements are analyzed in the lab frame and in the body frame to extract the intrinsic anisotropic translational diffusion coefficients as well as the rotational diffusion coefficient for both strains. The deflagellated strain is found to show an anisotropic translational diffusion, with diffusion coefficients that are compatible with theoretical estimates based on its measured geometrical features. The corresponding translational diffusion coefficients of the flagellated strain have been found to be reduced as compared to those of the deflagellated counterpart. Similar results have also been found for the rotational diffusion coefficients of the two strains. Our results suggest that the presence of flagella --even as a passive component-- has a significant role in the dynamics of E. coli, and should be taken into account in theoretical studies of its motion.
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Pseudogap of Metallic Layered Nickelate R2-xSrxNiO4 (R=Nd,Eu) Crystals Measured Using Angle-Resolved Photoemission Spectroscopy

Physical Review Letters American Physical Society (APS) 106:2 (2011) 027001

Authors:

M Uchida, K Ishizaka, P Hansmann, Y Kaneko, Y Ishida, X Yang, R Kumai, A Toschi, Y Onose, R Arita, K Held, OK Andersen, S Shin, Y Tokura
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Active Polymer Translocation through Flickering Pores

PHYSICAL REVIEW LETTERS 107:23 (2011) ARTN 238102

Authors:

Jack A Cohen, Abhishek Chaudhuri, Ramin Golestanian
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Coherent Hydrodynamic Coupling for Stochastic Swimmers

ArXiv 1007.2077 (2010)

Authors:

Ali Najafi, Ramin Golestanian

Abstract:

A recently developed theory of stochastic swimming is used to study the notion of coherence in active systems that couple via hydrodynamic interactions. It is shown that correlations between various modes of deformation in stochastic systems play the same role as the relative internal phase in deterministic systems. An example is presented where a simple swimmer can use these correlations to hunt a non-swimmer by forming a hydrodynamic bound state of tunable velocity and equilibrium separation. These results highlight the significance of coherence in the collective behavior of nano-scale stochastic swimmers.
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