Probing passive diffusion of flagellated and deflagellated Escherichia coli.
The European physical journal. E, Soft matter 34:2 (2011) 1-7
Abstract:
Using particle-tracking techniques, the translational and rotational diffusion of paralyzed E. coli with and without flagella are studied experimentally. The position and orientation of the bacteria are tracked in the lab frame and their corresponding mean-square displacements are analyzed in the lab frame and in the body frame to extract the intrinsic anisotropic translational diffusion coefficients as well as the rotational diffusion coefficient for both strains. The deflagellated strain is found to show an anisotropic translational diffusion, with diffusion coefficients that are compatible with theoretical estimates based on its measured geometrical features. The corresponding translational diffusion coefficients of the flagellated strain have been found to be reduced as compared to those of the deflagellated counterpart. Similar results have also been found for the rotational diffusion coefficients of the two strains. Our results suggest that the presence of flagella --even as a passive component-- has a significant role in the dynamics of E. coli, and should be taken into account in theoretical studies of its motion.Many-body theory of synchronization by long-range interactions.
Physical review letters 106:6 (2011) 064101
Abstract:
Synchronization of coupled oscillators on a d-dimensional lattice with the power-law coupling G(r) = g0/rα and randomly distributed intrinsic frequency is analyzed. A systematic perturbation theory is developed to calculate the order parameter profile and correlation functions in powers of ϵ = α/d-1. For α ≤ d, the system exhibits a sharp synchronization transition as described by the conventional mean-field theory. For α > d, the transition is smeared by the quenched disorder, and the macroscopic order parameter ψ decays slowly with g0 as |ψ| ∝ g(0)(2).Probing passive diffusion of flagellated and deflagellated Escherichia coli.
Eur Phys J E Soft Matter 34:2 (2011) 16
Abstract:
Using particle-tracking techniques, the translational and rotational diffusion of paralyzed E. coli with and without flagella are studied experimentally. The position and orientation of the bacteria are tracked in the lab frame and their corresponding mean-square displacements are analyzed in the lab frame and in the body frame to extract the intrinsic anisotropic translational diffusion coefficients as well as the rotational diffusion coefficient for both strains. The deflagellated strain is found to show an anisotropic translational diffusion, with diffusion coefficients that are compatible with theoretical estimates based on its measured geometrical features. The corresponding translational diffusion coefficients of the flagellated strain have been found to be reduced as compared to those of the deflagellated counterpart. Similar results have also been found for the rotational diffusion coefficients of the two strains. Our results suggest that the presence of flagella --even as a passive component-- has a significant role in the dynamics of E. coli, and should be taken into account in theoretical studies of its motion.Pseudogap of metallic layered nickelate R(2-x)Sr(x)NiO4 (R = Nd, Eu) crystals measured using angle-resolved photoemission spectroscopy.
Physical review letters 106:2 (2011) 027001
Abstract:
We have investigated charge dynamics and electronic structures for single crystals of metallic layered nickelates, R(2-x)Sr(x)NiO4 (R = Nd, Eu), isostructural to La(2-x)Sr(x)CuO4. Angle-resolved photoemission spectroscopy on the barely metallic Eu(0.9)Sr(1.1)NiO4 (R = Eu, x = 1.1) has revealed a large hole surface of x2-y2 character with a high-energy pseudogap of the same symmetry and comparable magnitude with those of underdoped (x<0.1) cuprates, although the antiferromagnetic interactions are 1 order of magnitude smaller. This finding strongly indicates that the momentum-dependent pseudogap feature in the layered nickelate arises from the real-space charge correlation.Active Polymer Translocation through Flickering Pores
PHYSICAL REVIEW LETTERS 107:23 (2011) ARTN 238102