Condensation-driven phase transitions in perturbed string nets
Physical Review B 96:15 (2017)
High-Speed “4D” Computational Microscopy of Bacterial Surface Motility
ACS Nano American Chemical Society (ACS) 11:9 (2017) 9340-9351
Abstract:
Bacteria exhibit surface motility modes that play pivotal roles in early-stage biofilm community development, such as type IV pili-driven "twitching" motility and flagellum-driven "spinning" and "swarming" motility. Appendage-driven motility is controlled by molecular motors, and analysis of surface motility behavior is complicated by its inherently 3D nature, the speed of which is too fast for confocal microscopy to capture. Here, we combine electromagnetic field computation and statistical image analysis to generate 3D movies close to a surface at 5 ms time resolution using conventional inverted microscopes. We treat each bacterial cell as a spherocylindrical lens and use finite element modeling to solve Maxwell's equations and compute the diffracted light intensities associated with different angular orientations of the bacterium relative to the surface. By performing cross-correlation calculations between measured 2D microscopy images and a library of computed light intensities, we demonstrate that near-surface 3D movies of Pseudomonas aeruginosa translational and rotational motion are possible at high temporal resolution. Comparison between computational reconstructions and detailed hydrodynamic calculations reveals that P. aeruginosa act like low Reynolds number spinning tops with unstable orbits, driven by a flagellum motor with a torque output of ∼2 pN μm. Interestingly, our analysis reveals that P. aeruginosa can undergo complex flagellum-driven dynamical behavior, including precession, nutation, and an unexpected taxonomy of surface motility mechanisms, including upright-spinning bacteria that diffuse laterally across the surface, and horizontal bacteria that follow helicoidal trajectories and exhibit superdiffusive movements parallel to the surface.Deconfined quantum critical points: Symmetries and dualities
Physical Review X American Physical Society 7:3 (2017) 031051
Abstract:
The deconfined quantum critical point (QCP), separating the Néel and valence bond solid phases in a 2D antiferromagnet, was proposed as an example of ð2 þ 1ÞD criticality fundamentally different from standard Landau-Ginzburg-Wilson-Fisher criticality. In this work, we present multiple equivalent descriptions of deconfined QCPs, and use these to address the possibility of enlarged emergent symmetries in the low-energy limit. The easy-plane deconfined QCP, besides its previously discussed self-duality, is dual to N f ¼ 2 fermionic quantum electrodynamics, which has its own self-duality and hence may have an Oð4Þ × Z T 2 symmetry. We propose several dualities for the deconfined QCP with SU(2) spin symmetry which together make natural the emergence of a previously suggested SO(5) symmetry rotating the Néel and valence bond solid orders. These emergent symmetries are implemented anomalously. The associated infrared theories can also be viewed as surface descriptions of ð3 þ 1ÞD topological paramagnets, giving further insight into the dualities. We describe a number of numerical tests of these dualities. We also discuss the possibility of “pseudocritical” behavior for deconfined critical points, and the meaning of the dualities and emergent symmetries in such a scenario.Deconfinement transitions in a generalised XY model
Journal of Physics A: Mathematical and Theoretical IOP Publishing 50:42 (2017) 424003-424003