Condensed Matter Theory

Abstract:

Fitness landscapes are often described in terms of 'peaks' and 'valleys', indicating an intuitive low-dimensional landscape of the kind encountered in everyday experience. The space of genotypes, however, is extremely high dimensional, which results in counter-intuitive structural properties of genotype-phenotype maps. Here we show that these properties, such as the presence of pervasive neutral networks, make fitness landscapes navigable. For three biologically realistic genotype-phenotype map models-RNA secondary structure, protein tertiary structure and protein complexes-we find that, even under random fitness assignment, fitness maxima can be reached from almost any other phenotype without passing through fitness valleys. This in turn indicates that true fitness valleys are very rare. By considering evolutionary simulations between pairs of real examples of functional RNA sequences, we show that accessible paths are also likely to be used under evolutionary dynamics. Our findings have broad implications for the prediction of natural evolutionary outcomes and for directed evolution.

Abstract:

We show that the gapless boundary signatures - namely, chiral/helical hinge modes or localized zero modes - of three-dimensional higher-order topological insulators and superconductors with inversion symmetry can be gapped without symmetry breaking upon the introduction of non-Abelian surface topological order. In each case, the fractionalization pattern that appears on the surface is "anomalous"in the sense that it can be made consistent with symmetry only on the surface of a three-dimensional higher-order insulator/superconductor. Our results show that the interacting manifestation of higher-order topology is the appearance of "anomalous gapped boundaries"between distinct topological orders whose quasiparticles are related by inversion, possibly in conjunction with other protecting symmetries such as time-reversal symmetry and charge conservation.